Experimental Orchard Flooding in California During El Nino

Scientific American:

Those most critically affected by the state's four-year drought are the Central Valley's farmers, whose livelihoods are threatened. Without rain to irrigate croplands, growers repeatedly turn to underground aquifers, but the overpumping has taken a toll, causing water tables to drop dramatically.
Fortunately, this winter's forecast in California calls for plenty of rain, most likely amplified by strong El Niño conditions. Storm drainage systems typically redirect most floodwater out to sea, but given the region's intense water deficit, hydrology scientists at the University of California, Davis, are experimenting with so-called groundwater banking, which involves sending storm water to flood fallow fields where it can percolate into the soil and replenish aquifers. Storm water absorbed in the winter can then serve as a reservoir of summer refreshment for growing crops, says U.C. Davis's Helen Dahlke.
For two months this winter Dahlke and her team will flood almond orchards in the Central Valley near Davis to a depth of two feet by redirecting rainfall through a network of ditches originally designed to divert floodwater away. To measure success, they will then monitor how much water filters into the water table over the course of two years. They will also test the quality of the infiltrated water and check trees for root rot, which could be detrimental to crop yield. If the method pans out, pear, plum and walnut tree orchards might also benefit from intentional flooding, according to a recent study led by Anthony O'Geen of the University of California's Division of Agriculture and Natural Resources.
Previous tests of the technique have proved successful. In 2011 Terranova Ranch manager Don Cameron diverted Kings River floodwater in Fresno County onto 240 acres of vineyards and other farmland, inundating them for five months. “They looked like rice fields, but the grapes did fine,” Cameron says. Seventy percent of the water percolated into the water table, where it was available for pumping back onto fields during the next growing cycle.
Questions remain about groundwater banking's effects on tree physiology and the extent to which salts and nitrates from fertilizers could migrate into drinking water.

Wow.  It is hard to imagine how that would be good for fruit or nut trees if the water was going to sit there for a very long time.